Ambient Science: Click the Volume and issue number for Complete Article

Location where to get the Complete Article --> Ambient Science: Vol 1, No 2 (2014): 09-16

ISSN- 2348-5191 (Print version); 2348-8980 (Online)

A Summary of Some Microbes Identified from Different Indian Caves and Their Possible Role in Mineral Formations



Sushmitha Baskar, Ramanathan Baskar

Abstract

Microbe-mineral interactions in caves can lead to secondary mineral formations such as speleothems, moonmilk etc. In the present review, we provide a summary of geomicrobiological work done so far in some Indian caves. Microbially induced mineralization is documented in cave ecosystems and microbial metabolisms help in mineral formations either through direct/active or indirect/passive processes. Laboratory based experiments conducted on speleothems from Sahastradhara caves (Dehradun); Borra Cave (Andhra Pradesh); Krem Phyllut, Krem Mawsmai, Krem Mawmluh and Rongai Dobhakol (Meghalaya) have clearly demonstrated that bacterial strains isolated from these caves have the capability to precipitate minerals under controlled conditions.


References

  • Amann R.I., Ludwig W. & Schleifer K.H. (1995):. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59: 143-169.
  • Banfield J.F., Welch S.A. & Edwards K.J. (1998): Microbes as geochemical agents. The geochemical news, 96: 11-17.
  • Banfield J.F., Welch S.A., Zhang H., Ebert T.T. & Penn R.L. (2000): Aggregation-based crystal growth and microstructure development in natural iron oxyhydroxide biomineralization products. Science, 289:75-1754.
  • Barton H.A. (2006): Introduction to cave microbiology: A review for the non-specialist. J. Cave Karst Stud., 68, 43-54.
  • Barton H.A.. & Jurado V. (2007): What's up down there? Microbial diversity in caves. Microbe, 2:132-138.
  • Barton H.A..& Northup D.E.. (2007): Geomicrobiology in cave environments: past, current and future perspectives: J. Cave Karst Stud., 69(1): 163-178.
  • Barton H.A., Taylor M.R.; Kreate M.P., Springer A.C., Oehrle S.A. & Bertog J.L. (2007): The impact of host rock geochemistry on bacterial community structure in oligotrophic cave environments. Intl J Speleol .36:93-104.
  • Barton H.A., Taylor M.R. & Pace N.R. (2004): Molecular phylogenetic analysis of a bacterial community in an oligotrophic cave environment: Geomicrobiol. J., 21: 11-20.
  • Bas M.J.L., Subbarao K.V.. & Walsh J.N.. (2002): Metacarbonatite or marble? the case of the carbonate, pyroxenite, calcite apatite rock complex at Borra, Eastern Ghats, India. J. Asian Earth Sci., 20: 127-140.
  • Baskar S., Baskar R.; Mauclaire L. & McKenzie J.A. (2005): Role of microbial community in stalctite formation, Sahastradhara caves, Dehradun, India. Curr. Sci. India, 88, 1305-1308.
  • Baskar S., Baskar R., Mauclaire L. & McKenzie J.A. (2006): Microbially induced calcite precipitation in culture experiments:possible origin for stalactites in Sahastradhara caves, Dehradun, India. Curr. Sci. India, 90, 58-64.
  • Baskar S., Baskar R., Lee N., Kaushik A. & Theophilus P.K. (2008): Precipitation of iron in the microbial mats of the spring waters of Borra Caves, Vishakapatnam, India: Some geomicrobiological aspects. Environmental Geology, Springer Publication, Vol. 56, No.2 237-243.
  • Baskar S., Baskar R., Lee N. & Theophilus P.K. (2009a): Speleothem formations of Mawsmai caves and Krem Phyllut caves, Meghalaya, India: Some evidences for biogenic activities. In: Environmental Earth Science (Springer Publication), Volume 57, Number 5, 1169-1186.
  • Baskar S. & Baskar R. (2009b). Geobiology and Geomicrobiology: Importance and need for studies in the Indian context, Curr. Sci. India, 96(1): 200-201.
  • Baskar S., Baskar R. & Barton H.A. (2009c): Cave Geomicrobiology as a thrust area of research in the Indian context. Curr. Sci. India, 97(5): 621-622.
  • Baskar S., Baskar R. & Routh J. (2011): Biogenic Evidences of Moonmilk deposits in the Krem Mawmluh Cave, Meghalaya, India. Geomicrobiol. J., 28(3): 252-265.
  • Baskar S., Baskar R., Thorseth I.H., Øvreas L. & Pedersen R.B. (2012): Microbial iron precipitation associated with a neutrophilic spring of Borra caves, Vishakapatanam, India. Astrobiology Journal, 12(4): 327-346.
  • Baskar S., Baskar R. & Routh J. (2014): Speleothems from Sahastradhara caves in Siwalik Himalaya, India: Possible biogenic inputs. Geomicrobiol. J., 31(8):664-681.
  • Biswas J. (2009): The biodiversity of Krem Mawkhyrdop of Meghalaya, India, on the verge of extinction. Curr. Sci. India, 96: 904-910.
  • Biswas J. (2010): Kotumsar cave biodiversity: a review of cavernicoles and their troglophilic traits. Biodivers. Conserv. 19(1): 279-285.
  • Biswas J. & Ramteke A.K. (2008): Timed feeding synchronizes circadian rhythm in vertical swimming activity in cave loach, Nemacheilus evezardi. Biol. Rhythm Res., 39 (5), 405-412.
  • Boston P.J., Spilde M.N., Northup D.E., Melim L.A., Soroka D.S., Kleina L.G., Lavoie K.H., Hose L.D., Mallory L.M., Dahm C.N., Crossey L.J. & Schelble R.T. (2001): Cave biosignature suites: Microbes, minerals and Mars. Astrobiology, 1(1):25-55.
  • Boston P.J., Soroka D.S., Kleina L.G., Lavoie K.H., Spilde M.N., Northup D.E. & Hose L.D. (2000): A garden inside out: microbial mats in springs, wall muds, and ceiling formations of a sulfur-dominated cave, Cueva de Villa Luz, Tabasco, Mexico. J. Cave Karst Stud., 62(3):198199.
  • Cacchio P., Contento R., Ercole C., Cappuccio G., Martinez M.P. & Lepidi A. (2004): Involvement of microorganisms in the formation of carbonate speleothems in the Cervo Cave (L'Aquila - Italy). Geomicrobiol. J., 21: 497-509.
  • Canaveras J.C., Cuezva S., Sanchez-Moral S., Lario J., Laiz L., Gonzalez J.M. & Saiz-Jimenez C. (2006): On the origin of fiber calcite crystals in moonmilk deposits. Naturwissenschaften, 93:27-32.
  • Curry M.D., Boston P.J., Spilde M.N., Baichtal J.F. & Campbell A.R. (2009): Cottonballs, a unique subaqeous moonmilk, and abundant subaerial moonmilk in Cataract Cave, Tongass National Forest, Alaska. Inter J Speleol , 38(2):111-128.
  • Danielli H.M.C. & Edington M.A. (1983):. Bacterial calcification in limestone caves. Geomicrobiol. J., 3: 116.
  • Deshmukh M. (1994): Influence of geology on the localization of ancient caves. J. Geol. Soc. India, 44:213-217.
  • Ehrlich H.L. (1998): Geomicrobiology: its significance for geology Earth-Science Reviews, 45: 45-60.
  • Engel S.E., Lee N., Porter M.L., Stern A.L., Bennett P.C. & Wagner M. (2003): Filamentous Epsilonproteobacteria dominate microbial mats from sulfidic cave springs. Appl Environ Microbiol., 69: 5503.
  • Engel A.S., Porter M.L., Stern L.A.Quinlan S. & Bennett P.C. (2004): Bacterial diversity and ecosystem function of filamentous microbial mats from aphotic (cave) sulfidic springs dominated by chemolithoautotrophic ''Epsilonproteobacteria''. FEMS Microbiol Ecol., 51, 31-53.
  • Engel A.S., Meisinger D.B., Porter M.L., Payn R.A., Schmid M., Schleifer K.H. & Lee N.M. (2010): Linking Phylogenetic and Functional Diversity to Nutrient Spiralling in Microbial Mats from Lower Kane Cave (USA). The ISME Journal, 4: 98-110.
  • Engel A.S., Paoletti M.G., Beggio M., Dorigo L., Pamio A., Gomero T., Furlan C., Brilli M., Bertoni R., Dreon A.L. & Squartini A. (2013): Comparative microbial community composition from secondary carbonate (moonmilk) deposits: implications for the Cansiliella servadeii cave hygropetric food web. Int J Speleol., 42 (3): 181-92.
  • Frisia S., Borsato A., Fairchild I.J., McDermott F. & Selmo E.M. (2002): Aragonite-calcite relationships in speleothems (Grotte De Clamouse, France): Environment, fabrics and carbonate geochemistry. J. Sediment. Res., 72: 687=699.
  • Hammes F. & Verstraete W. (2002): Key roles of pH and calcium metabolism in microbial carbonate precipitation. Reviews in Environment. Sci. Biotechnol., 1: 3-7.
  • Harries D.B., Ware F.J., Fisher C.W., Biswas J. & Kharpran-Daly B.D. (2008): A review of the biospeleology of Meghalaya, India. J. Cave Karst Stud., 70: 163-176.
  • Jones B. (2001): Microbial activity in Caves - A Geological Perspective. Geomicrobiol. J. , 18: 345-357.
  • Kharpran-Dally B.D. (2006): The Caves of Meghalaya. Published by the Directorate of information and public relations. Government of Meghalaya pp. 90.
  • Konhauser K.O. (1998): Diversity of bacterial iron mineralization. Earth Sci Rev , 43: 91-121.
  • Meisinger D.B., Zimmermann J., Ludwig W., Schleifer K.H., Wanner G. Schmid M., Bennett P.C., Engel A.S.& Lee N.M. (2007): In situ detection of novel Acidobacteria in microbial mats from a chemolithoautotrophically-based cave system (Lower Kane Cave, WY, USA). Environmental Microbiology, 9(6) 1523-1534.
  • Melim L.A; Shinglman K.M., Boston P.J., Northup D.E., Spilde M.N..& Queen J.M. (2001): Evidence for microbial involvement in pool finger precipitations, Hidden cave, New Mexico. Geomicrobiol. J., 18: 311-329.
  • Melim L.A., Liescheidt R., Northup D.E., Spilde M.N., Boston P.J. & Queen J.M. (2009): A Biosignature Suite from Cave Pool Precipitates, Cottonwood Cave, New Mexico. Astrobiology, 9(9):907-917.
  • Mulec J., Zalar P., Zupan Hajna N. & Rupnik M. (2002): Screening for Culturable Microorganisms from Cave Environments (Slovenia). Acta Carsologica, 31(2): 177-187.
  • Newman D.K.. & Banfield JF. (2002): Geomicrobiology: molecular-scale interactions underpin biogeochemical systems. Science, 296,:1071-1077.
  • Northup D.E. & Lavoie K.H. (2001): Geomicrobiology of caves: a review. Geomicrobiol. J., 18:199-222.
  • Northup D.E., Reysenbach A.L. & Pace N.R. (1997): Microorganisms and speleothems. In: CA. Hill, P. Forti (eds) Cave minerals of the world. National Speleological Society, Huntsville, 261-266.
  • Poulson T.L. & Lavoie K.H. (2000): The trophic basis of subsurface ecosystems. In: DC. Wilkens, DC. Culver, WF. Humphreys (eds) Ecosystems of the world 30. Elsevier, Amsterdam, 231-249.
  • Rivadeneyra M.A., Delgado R., Delgado G., Del Moral A., Ferrer M.R. & Ramos-Cormenza A. (1993): Precipitation of carbonate by Bacillus sp. isolated from saline soils. Geomicrobiol. J., 11: 175-184.
  • Roussel E.G., Cambon Bonavita M.A., Querellou J., Cragg B.A;,Webster G., Prieur D. & Parkes RJ. (2008): Extending the sub-seafloor biosphere. Science, 320: 1046.
  • Shoji R. & Folk R.L. (1964): Surface morphology of some limestone types as revealed by electron microscope: Journal of Sedimentary Research, 34, 144-155.
  • Simon K.S., Benfield E.F. & Macko S.A. (2003):. Food web structure and the role of epilthic biofilms in cave streams. Ecology, 84, 2395-2406.
  • Srivastava D.K., Singh A.P., Tiwari R.P. & Jauhri A.K. (2008): Cassiduloids (Echinoidea) from the Siju Formation (late Lutetian-early Bartonian) of the South Garo Hills, Meghalaya, India. Revue de Paléobiologie, Genève, 27 (2): 511-523.
  • Whitman W.B., Coleman D.C. & Wiebe W.J. (1998): Prokaryotes: The unseen majority. Proc. Natl. Acad. Sci. USA, 95: 6578-6583

  • DOI:10.21276/ambi.2014.01.2.rv01


    Creative Commons License


    This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.
    Published by: National Cave Research and Protection Organization, India

    <Environmental Science+Zoology+Geology+Cave Science>AMBIENT SCIENCE