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Ambient Science: Vol 3, No 2 (2016): 30-36 |
ISSN- 2348-5191 (Print version); 2348-8980 (Online) |
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Best, Useful and Objective Precisions for Information Retrieval of Three Search Methods in PubMed and iPubMed
Somayyeh Nadi Ravandi, Nadjla Hariri, Mehrdad Farzandipour
Abstract
MEDLINE is one of the valuable sources of medical information on the Internet. Among the different open access sites of MEDLINE, PubMed is the best-known site. In 2010, iPubMed was established with an interaction-fuzzy search method for MEDLINE access. In the present work, we aimed to compare the precision of the retrieved sources (Best, Useful and Objective precision) in the PubMed and iPubMed using two search methods (simple and MeSH search) in PubMed and interaction-fuzzy method in iPubmed. During our semi-empirical study period, we held training workshops for 61 students of higher education to teach them Simple Search, MeSH Search, and Fuzzy-Interaction Search methods. Then, the precision of 305 searches for each method prepared by the students was calculated on the basis of Best precision, Useful precision, and Objective precision formulas. Analyses were done in SPSS version 11.5 using the Friedman and Wilcoxon Test, and three precisions obtained with the three precision formulas were studied for the three search methods. The mean precision of the interaction-fuzzy Search method was higher than that of the simple search and MeSH search for all three types of precision, i.e., Best precision, Useful precision, and Objective precision, and the Simple search method was in the next rank, and their mean precisions were significantly different (P < 0.001). The precision of the interaction-fuzzy search method in iPubmed was investigated for the first time. Also for the first time, three types of precision were evaluated in PubMed and iPubmed. The results showed that the Interaction-Fuzzy search method is more precise than using the natural language search (simple search) and MeSH search, and users of this method found papers that were more related to their queries; even though search in Pubmed is useful, it is important that users apply new search methods to obtain the best results.
References
Acharya, K.K., Kasliwal, G. & Haridas, H. (2008): A comparative analysis of 21 literature search engines: Nature Pub. Group.
Bajpai, A.K., Davuluri, S., Haridas, H. & Kasliwal, G. (2011): In search of the right literature search engine (s): Nature Preceding.
Chang, A.A., Heskett, K.M. & Davidson, T.M. (2006): Searching the literature using medical subject headings versus text word with PubMed. Laryngoscope, 116(2): 336-340.
Cohen, A.M. & Hersh, W.R. (2005): A survey of current work in biomedical text mining. Brief. Bioinform., 6(1): 57-71.
Garnett, A., Piwowar, H.A., Rasmussen, E.M. & Illes, J. (2010): Formulating MEDLINE queries for article retrieval based on PubMed exemplars. Nature Preceding.
Gehanno, J-F, Rollin, L., Le Jean, T., Louvel, A., Darmoni, S. & Shaw, W. (2009): Precision and recall of search strategies for identifying studies on return-to-work in MEDLINE: J. Occupl. Rehabil.,19(3): 223-230.
Giustini, D. & Barsky, E. (2005): A look at Google Scholar, PubMed, and Scirus: comparisons and recommendations. J. Can. Heal. Lib. Asso., 26(3): 859.
Gwizdka, J. & Chignell, M. (1999): Towards information retrieval measures for evaluation of Web search engines, (IML Technical Report -99-01), University of Toronto.
Hariri, N. (2011): Relevance ranking on Google: Are top ranked results really considered more relevant by the users? Online Inf. Review, 35(4): 598-610.
Hariri, N & Nadi Ravandi, N.S. (2014): Comparing the Precision of Information Retrieval of MeSH-Controlled Vocabulary Search Method and a Visual Method in the MEDLINE Medical Database: Electron Physician. 6(2); 832-837.
Harrison, J. (1997): Designing a search strategy to identify and retrieve articles on evidence-based health care using MEDLINE. Health Libr. Revi.,14(1): 33-42.
Haynes, R.B., McKibbon, K., Walker, C.J., Moussau, J., Baker, L.M., Fitzgerald, D., Guyatt, G. & Norman, G.R. (1985): Computer Searching of the Medical LiteratureAn Evaluation of MEDLINE Searching Systems. Ann. Intern.Med.,103(5):812-816.
Jenuwine, E.S. & Floyd, J.A. (2004): Comparison of Medical Subject Headings and text-word searches in MEDLINE to retrieve studies on sleep in healthy individuals: J. Med. Lib. Assoc., 92(3):349.
Liu, Y-H. (2010): On the potential search effectiveness of MeSH (medical subject headings) terms. Proceedings of the third symposium on Information interaction in context.
López-Herrera, A.G., Herrera-Viedma, E. & Herrera, F. (2008): A multiobjective evolutionary algorithm for spam e-mail filtering. Proceedings of 3rd International Conference on Intelligent System and Knowledge Engineering.
Pappas, D.E. & Owen, H.J. (2003): Otitis media. A scholarly review of the evidence. Minerva Pediatr., 55(5);407-414.
Pereda, R. & Taghva, K. (2011): Fuzzy Information Extraction on OCR Text: Eighth International Conference Information Technology. New Generat., p. 5436.
Poulter, G.L., Rubin, D.L., Altman, R.B. & Seoighe, C. (2008): MScanner: a classifier for retrieving MEDLINE citations. BMC Bioinformatics. 9(1):108-119.
Samadzadeh, G.R., Rigi, T. & Ganjali, A. (2013): Comparison of Four Search Engines and their efficacy With Emphasis on Literature Research in Addiction (Prevention and Treatment) Int. J. High Risk behav. Addic., 1(4):166-171.
Shariff, S.Z., Bejaimal, S.A.D., Sontrop, J.M., Iansavichus, A.V., Haynes, R.B., Weir, M.A. & Garg, A. (2013): Retrieving clinical evidence: a comparison of PubMed and Google Scholar for quick clinical searches: J. Med. Internet Res., 15(8); e164.
Suomela, B.P. & Andrade, M.A. (2005): Ranking the whole MEDLINE database according to a large training set using text indexing. BMC Bioinformatics. 6(1):75.
Ugolini, D., Neri, M., Knudsen, L.E., Bonassi, S. & Merlo, D.F. (2006): Searching PubMed for molecular epidemiology studies: the case of chromosome aberrations. Environ. Mol. Mutagen., 47(4):227-229.
Vincent, B., Vincent, M., & Erreira, C.G. (2006): Making PubMed searching simple: learning to retrieve medical literature through interactive problem solving.Oncologist.11(3):243-251.
Walters, W.H. (2011): Comparative recall and precision of simple and expert searches in Google Scholar and eight other databases: portal: Libr. Acad., 11(4): 971-1006.
Wang, J., Cetindi, I., Ji, S., Li, C., Xie, X., Li, G. & Feng, J. (2010): Interactive and fuzzy search: a dynamic way to explore MEDLINE: Bioinformatic. 26(18):2321-2327.
Yap, K.H. & Wu K. (2005): Fuzzy relevance feedback in content-based image retrieval systems using radial basis function network. Proceedings of Information, Communications and Signal Processing, 3:1595 - 1599.
Ye, H. (2007): A Neural Network based Software Retrieval System with Fuzzy-Related Thesaurus: Int. J. Comput. Intelligence Res., 3(1):78-84.
Zhou, X., Hu, X., Lin, X., Han, H. & Zhang, X. (2006): Relation-based documen retrieval for biomedical literature databases. Database Sy. Adv. Appl., 38882: 689-701.
Zohour, A.R., Garakani, A.F. & Sarabi, E.R. (2003): Evaluation Of Five Free Medline Sites In Internet. Int. J. Res. Med. Sci., 8(3):116-117.
DOI:10.21276/ambi.2016.03.2.Ta02

This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.
Published by: National Cave Research and Protection Organization, India
<Environmental Science+Zoology+Geology+Cave Science>AMBIENT SCIENCE
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